CRISPRone
CRISPRone report for GCA_901006415.1_8140_6_92
♦ Seq 1: CAAKCE010000002.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000002, whole genome shotgun sequence
⇒Summary: seq-len = 372547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR
)
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 190055-190150 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: CAAKCE010000005.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000005, whole genome shotgun sequence
⇒Summary: seq-len = 244871 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 28790-28951 bp]: array | spacers
[Locus range 138210-138830 bp]: array | spacers
[Locus range 229679-229906 bp]: array | spacers
[Locus range 232573-232734 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKCE010000001.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 585163 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 98011-98237 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKCE010000003.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 293398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 128874-129294 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 28790-28951 bp]: array | spacers
[Locus range 138210-138830 bp]: array | spacers
[Locus range 229679-229906 bp]: array | spacers
[Locus range 232573-232734 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: CAAKCE010000001.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000001, whole genome shotgun sequence
⇒Summary: seq-len = 585163 bp; # of CRISPR array = 1; # of cas gene = 10 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 98011-98237 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: CAAKCE010000003.1 Clostridioides difficile strain LSHTM-92 genome assembly, contig: ERS139989SCcontig000003, whole genome shotgun sequence
⇒Summary: seq-len = 293398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 128874-129294 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 128874-129294 bp]: array | spacers