CRISPRone

CRISPRone report for GCA_901010245.1_Pseudomonas_aeruginosa

♦ Seq 1: CAAKMM010000003.1 Pseudomonas aeruginosa isolate blood genome assembly, contig: tig00007581:0-2469867_pilon, whole genome shotgun sequence

⇒Summary: seq-len = 2477500 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1969179-1979800 bp Zoom in on locus 1 x19 x16 CRISPR array Location: 1969179-1970287 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1969179-1970287 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 1970548-1971522 bp Gene: COG1203:cas3 Type: Type-I Location: 1971519-1974749 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1974807-1976111 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1976098-1977081 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1977092-1978120 bp Gene: cd09739:cas6f Type: other Location: 1978124-1978687 bp CRISPR array Location: 1978872-1979800 bp Num of repeats: 16 Spacers: s19-s33 CRISPR array Location: 1978872-1979800 bp Num of repeats: 16 Spacers: s19-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1969179-1970287 bp]: array | spacers
           [Locus range 1978872-1979800 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)