CRISPRone

CRISPRone report for GCA_901456165.1_9_P_PA_hybrid_assembly

♦ Seq 1: CABDWU010000001.1 Pseudomonas aeruginosa isolate 9_P_PA genome assembly, contig: 1, whole genome shotgun sequence

⇒Summary: seq-len = 1941814 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 360563-361191 bp Zoom in on locus 1 x11 CRISPR array Location: 360563-361191 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 360563-361191 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 360563-361191 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CABDWU010000011.1 Pseudomonas aeruginosa isolate 9_P_PA genome assembly, contig: 2, whole genome shotgun sequence

⇒Summary: seq-len = 1894580 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1809374-1819959 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1809374-1810243 bp Gene: pfam00078:RT Type: other Location: 1815152-1816420 bp Gene: unk Type: unknown Location: 1816570-1816968 bp Gene: unk Type: unknown Location: 1817152-1817331 bp Gene: cls000170:cas4 Type: Type-I Location: 1818415-1819959 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)