CRISPRone

CRISPRone report for GCA_901456185.1_11_P_PA_hybrid_assembly

♦ Seq 1: CABDWV010000001.1 Pseudomonas aeruginosa isolate 11_P_PA genome assembly, contig: 1, whole genome shotgun sequence

⇒Summary: seq-len = 1894702 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1809496-1820081 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1809496-1810365 bp Gene: pfam00078:RT Type: other Location: 1815274-1816542 bp Gene: unk Type: unknown Location: 1816692-1817090 bp Gene: unk Type: unknown Location: 1817274-1817453 bp Gene: cls000170:cas4 Type: Type-I Location: 1818537-1820081 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CABDWV010000009.1 Pseudomonas aeruginosa isolate 11_P_PA genome assembly, contig: 4, whole genome shotgun sequence

⇒Summary: seq-len = 948850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 360562-361190 bp Zoom in on locus 1 x11 CRISPR array Location: 360562-361190 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 360562-361190 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 360562-361190 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)