CRISPRone

CRISPRone report for GCA_901456215.1_39_P_PA_hybrid_assembly

♦ Seq 1: CABDWY010000015.1 Pseudomonas aeruginosa isolate 39_P_PA genome assembly, contig: 5, whole genome shotgun sequence

⇒Summary: seq-len = 402657 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 74622-85207 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 74622-76166 bp Gene: unk Type: unknown Location: 77250-77429 bp Gene: pfam00078:RT Type: other Location: 78161-79429 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 84338-85207 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CABDWY010000001.1 Pseudomonas aeruginosa isolate 39_P_PA genome assembly, contig: 1, whole genome shotgun sequence

⇒Summary: seq-len = 1988153 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 360562-361130 bp Zoom in on locus 1 x10 CRISPR array Location: 360562-361130 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 360562-361130 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 360562-361130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)