CRISPRone

CRISPRone report for GCA_901456275.1_23_P_PA_hybrid_assembly

♦ Seq 1: CABDXE010000012.1 Pseudomonas aeruginosa isolate 23_P_PA genome assembly, contig: 2, whole genome shotgun sequence

⇒Summary: seq-len = 948853 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 360562-361190 bp Zoom in on locus 1 x11 CRISPR array Location: 360562-361190 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 360562-361190 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 360562-361190 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CABDXE010000033.1 Pseudomonas aeruginosa isolate 23_P_PA genome assembly, contig: 6, whole genome shotgun sequence

⇒Summary: seq-len = 402657 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 317451-328036 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 317451-318320 bp Gene: pfam00078:RT Type: other Location: 323229-324497 bp Gene: unk Type: unknown Location: 324647-325045 bp Gene: unk Type: unknown Location: 325229-325408 bp Gene: cls000170:cas4 Type: Type-I Location: 326492-328036 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)