CRISPRone

CRISPRone report for GCA_901472545.1_36340_E01

♦ Seq 1: LR590473.1 Pseudomonas aeruginosa strain NCTC13359 genome assembly, chromosome: 1

⇒Summary: seq-len = 6791490 bp; # of CRISPR array = 4; # of cas gene = 14  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3475867-3486306 bp 2 Locus 2: 4933559-4943855 bp Zoom in on locus 1 x19 x13 Zoom in on locus 2 x16 x11 CRISPR array Location: 3475867-3476975 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 3475867-3476975 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 3477158-3477721 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3477725-3478753 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3478764-3479747 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3479734-3481038 bp Gene: COG1203:cas3 Type: Type-I Location: 3481096-3484326 bp Gene: cd09718:cas1 Type: universal Location: 3484323-3485297 bp CRISPR array Location: 3485558-3486306 bp Num of repeats: 13 Spacers: s19-s30 CRISPR array Location: 3485558-3486306 bp Num of repeats: 13 Spacers: s19-s30 CRISPR array Location: 4933559-4934502 bp Num of repeats: 16 Spacers: s31-s45 CRISPR array Location: 4933559-4934502 bp Num of repeats: 16 Spacers: s31-s45 Gene: pfam09707:cas2 Type: universal Location: 4934567-4934866 bp Gene: cd09719:cas1 Type: universal Location: 4934863-4935174 bp Gene: pfam08798:cas6e Type: other Location: 4935201-4935740 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4935787-4936449 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4936451-4937593 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4937603-4938133 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4938130-4939698 bp Gene: cd09641:cas3HD Type: Type-I Location: 4939701-4942382 bp CRISPR array Location: 4943217-4943855 bp Num of repeats: 11 Spacers: s46-s55 CRISPR array Location: 4943217-4943855 bp Num of repeats: 11 Spacers: s46-s55 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3475867-3476975 bp]: array | spacers
           [Locus range 3485558-3486306 bp]: array | spacers
           [Locus range 4933559-4934502 bp]: array | spacers
           [Locus range 4943217-4943855 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)