CRISPRone

CRISPRone report for GCA_901482505.1_44310_H02

♦ Seq 1: CABEES010000084.1 Pseudomonas aeruginosa strain NCTC10299 genome assembly, contig: ERS1054598SCcontig000084, whole genome shotgun sequence

⇒Summary: seq-len = 80583 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-192 bp Zoom in on locus 1 x4 CRISPR array Location: 0-192 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 0-192 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-192 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CABEES010000038.1 Pseudomonas aeruginosa strain NCTC10299 genome assembly, contig: ERS1054598SCcontig000038, whole genome shotgun sequence

⇒Summary: seq-len = 155184 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 135280-144936 bp Zoom in on locus 1 x7 x12 CRISPR array Location: 135280-135674 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 135280-135674 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09718:cas1 Type: universal Location: 135925-136899 bp Gene: COG1203:cas3 Type: Type-I Location: 136896-140126 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 140184-141488 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 141475-142458 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 142469-143497 bp Gene: cd09739:cas6f Type: other Location: 143501-144064 bp CRISPR array Location: 144248-144936 bp Num of repeats: 12 Spacers: s7-s17 CRISPR array Location: 144248-144936 bp Num of repeats: 12 Spacers: s7-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 135280-135674 bp]: array | spacers
           [Locus range 144248-144936 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)