CRISPRone

CRISPRone report for GCA_901482535.1_43874_C01

♦ Seq 1: CABEEV010000008.1 Pseudomonas aeruginosa strain NCTC11839 genome assembly, contig: ERS1031246SCcontig000008, whole genome shotgun sequence

⇒Summary: seq-len = 6375037 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6084953-6095831 bp Zoom in on locus 1 x19 x9 CRISPR array Location: 6084953-6086080 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 6084953-6086080 bp Num of repeats: 19 Spacers: s1-s18 Gene: pfam09707:cas2 Type: universal Location: 6086145-6086444 bp Gene: cd09719:cas1 Type: universal Location: 6086441-6087331 bp Gene: pfam08798:cas6e Type: other Location: 6087358-6087897 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 6087944-6088606 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 6088608-6089750 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 6089760-6090290 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 6090287-6091855 bp Gene: cd09641:cas3HD Type: Type-I Location: 6091858-6094539 bp CRISPR array Location: 6095315-6095831 bp Num of repeats: 9 Spacers: s19-s26 CRISPR array Location: 6095315-6095831 bp Num of repeats: 9 Spacers: s19-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 6084953-6086080 bp]: array | spacers
           [Locus range 6095315-6095831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)