CRISPRone

CRISPRone report for GCA_902633025.1_BS3342

♦ Seq 1: CACPEN010000002.1 Pseudomonas aeruginosa strain 207 genome assembly, contig: scaffold2.1, whole genome shotgun sequence

⇒Summary: seq-len = 559414 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 532982-533612 bp Zoom in on locus 1 x11 CRISPR array Location: 532982-533612 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 532982-533612 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 532982-533612 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CACPEN010000022.1 Pseudomonas aeruginosa strain 207 genome assembly, contig: scaffold22.1, whole genome shotgun sequence

⇒Summary: seq-len = 80743 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32919-43239 bp Zoom in on locus 1 x17 x13 CRISPR array Location: 32919-33908 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 32919-33908 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 34169-35143 bp Gene: COG1203:cas3 Type: Type-I Location: 35140-38370 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38428-39732 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39719-40702 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40713-41741 bp Gene: cd09739:cas6f Type: other Location: 41745-42308 bp CRISPR array Location: 42492-43239 bp Num of repeats: 13 Spacers: s17-s28 CRISPR array Location: 42492-43239 bp Num of repeats: 13 Spacers: s17-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32919-33908 bp]: array | spacers
           [Locus range 42492-43239 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)