CRISPRone

CRISPRone report for GCA_905071885.1_MINF_3A

♦ Seq 1: LR898867.1 Pseudomonas aeruginosa isolate MINF_3A-sc-2280432 genome assembly, chromosome: 1

⇒Summary: seq-len = 6931859 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1530297-1530625 bp 2 Locus 2: 3016403-3027072 bp Zoom in on locus 1 x6 Zoom in on locus 2 x15 x21 CRISPR array Location: 1530297-1530625 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1530297-1530625 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 3016403-3017271 bp Num of repeats: 15 Spacers: s6-s19 CRISPR array Location: 3016403-3017271 bp Num of repeats: 15 Spacers: s6-s19 Gene: cd09739:cas6f Type: other Location: 3017454-3018017 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3018021-3019049 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3019060-3020043 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3020030-3021334 bp Gene: COG1203:cas3 Type: Type-I Location: 3021392-3024622 bp Gene: cd09718:cas1 Type: universal Location: 3024619-3025593 bp CRISPR array Location: 3025845-3027072 bp Num of repeats: 21 Spacers: s20-s39 CRISPR array Location: 3025845-3027072 bp Num of repeats: 21 Spacers: s20-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1530297-1530625 bp]: array | spacers
           [Locus range 3016403-3017271 bp]: array | spacers
           [Locus range 3025845-3027072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)