CRISPRone

CRISPRone report for GCA_000014845.1_ASM1484v1

♦ Seq 1: CP000468.1 Escherichia coli APEC O1, complete genome

⇒Summary: seq-len = 5082025 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 888139-897915 bp 2 Locus 2: 2169600-2172994 bp Zoom in on locus 1 x6 x7 Zoom in on locus 2 CRISPR array Location: 888139-888466 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 888139-888466 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09718:cas1 Type: universal Location: 888639-889622 bp Gene: COG1203:cas3 Type: Type-I Location: 889619-892852 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 893182-894489 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 894486-894701 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 894768-895409 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 895420-896421 bp Gene: cd09739:cas6f Type: other Location: 896432-896986 bp CRISPR array Location: 897527-897915 bp Num of repeats: 7 Spacers: s6-s11 CRISPR array Location: 897527-897915 bp Num of repeats: 7 Spacers: s6-s11 Gene: cd09669:cas8e Type: Subtype-I-E Location: 2169600-2170073 bp Gene: unk Type: unknown Location: 2170192-2171364 bp Gene: cd06127:DEDDh Type: Type-I Location: 2171567-2172994 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 888139-888466 bp]: array | spacers
           [Locus range 897527-897915 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)