CRISPRone

CRISPRone report for GCA_000361085.1_Stap_aure_M0408_V1

♦ Seq 1: KB821326.1 Staphylococcus aureus M0408 genomic scaffold acrHk-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1207723 bp; # of CRISPR array = 1; # of cas gene = 4  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 742483-748517 bp Zoom in on locus 1 x4 antiRepeat Location: 742483-742520 bp Strand: + Match length: 27 bp Mismatch: 9 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 742609-743523 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 743520-745769 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 745777-746682 bp Gene: cd09638:cas2 Type: Subtype-II-C Location: 746679-747002 bp antiRepeat Location: 747114-747149 bp Strand: + Match length: 19 bp Mismatch: 17 bp CRISPR array Location: 748032-748266 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 748032-748266 bp Num of repeats: 4 Spacers: s1-s3 antiRepeat Location: 748424-748459 bp Strand: + Match length: 26 bp Mismatch: 10 bp antiRepeat Location: 748482-748517 bp Strand: + Match length: 32 bp Mismatch: 4 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 748032-748266 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)