CRISPRone

CRISPRone report for GCA_003193745.1_ASM319374v1

♦ Seq 1: CP029653.1 Staphylococcus aureus strain AR_0470 chromosome, complete genome

⇒Summary: seq-len = 2963657 bp; # of CRISPR array = 2; # of cas gene = 13  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50409-73623 bp Zoom in on locus 1 x12 x2 Gene: pfam13280:WYL Type: other Location: 50409-51338 bp Gene: cd09691:cas8b1 Type: Subtype-I-B Location: 58726-59100 bp Gene: unk Type: unknown Location: 59194-59505 bp Gene: unk Type: unknown Location: 59520-60023 bp Gene: mkCas0152:cmr7 Type: Subtype-III-B Location: 60038-60259 bp Gene: unk Type: unknown Location: 60551-60826 bp CRISPR array Location: 61276-62099 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 61276-62099 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09720:cas1 Type: universal Location: 62243-63148 bp Gene: cd09638:cas2 Type: universal Location: 63148-63453 bp Gene: cd09680:cas10 Type: Type-III Location: 63467-65740 bp Gene: cd09647:csm2gr11 Type: Subtype-III-A Location: 65743-66168 bp Gene: cd09684:csm3gr7 Type: Type-III Location: 66170-66814 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 66825-67733 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 67736-68758 bp Gene: cd09699:csm6 Type: Subtype-III-A Location: 68758-70026 bp Gene: cd09652:cas6 Type: other Location: 70023-70757 bp CRISPR array Location: 71038-71143 bp Num of repeats: 2 Spacers: s12-s12 CRISPR array Location: 71038-71143 bp Num of repeats: 2 Spacers: s12-s12 Gene: unk Type: unknown Location: 71867-72025 bp Gene: unk Type: unknown Location: 72183-72584 bp Gene: unk Type: unknown Location: 72612-72989 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 73180-73623 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 61276-62099 bp]: array | spacers
           [Locus range 71038-71143 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)