CRISPRone

CRISPRone report for GCA_004103475.1_ASM410347v1

♦ Seq 1: CP035220.1 Enterococcus faecium strain SRCM103470 chromosome, complete genome

⇒Summary: seq-len = 2696269 bp; # of CRISPR array = 1; # of cas gene = 5  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 293422-299947 bp Zoom in on locus 1 x7 antiRepeat Location: 293422-293457 bp Strand: + Match length: 24 bp Mismatch: 12 bp Gene: mkCas0193:cas9 Type: Subtype-II-A Location: 293543-294856 bp Gene: COG3513:cas9 Type: Subtype-II-A Location: 294886-297564 bp Gene: cd09720:cas1 Type: Subtype-II-A Location: 297565-298431 bp Gene: cd09638:cas2 Type: Subtype-II-A Location: 298443-298772 bp Gene: cd09758:csn2 Type: Subtype-II-A Location: 298759-299424 bp CRISPR array Location: 299515-299947 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 299515-299947 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 299515-299947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)