Pathway reconstruction for genomes

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Species-IDDescriptionKEGGNaive mappingMinPathmap
HSAHomo sapiens (human) 205227191link
PTRPan troglodytes (chimpanzee) 199225190link
MCCMacaca mulatta (rhesus monkey) 199229189link
MMUMus musculus (mouse) 198224190link
RNORattus norvegicus (rat) 200225187link
CFACanis familiaris (dog) 205228191link
BTABos taurus (cow) 192219183link
SSCSus scrofa (pig) 167204124link
MDOMonodelphis domestica (opossum) 197224187link
OAAOrnithorhynchus anatinus (platypus) 165193110link
GGAGallus gallus (chicken) 139223185link
XLAXenopus laevis (African clawed frog) 133216156link
XTRXenopus tropicalis (western clawed frog) 126209138link
DREDanio rerio (zebrafish) 135219163link
SPUStrongylocentrotus purpuratus (purple sea urchin) 131213151link
NVENematostella vectensis (sea anemone) 135219151link
DMEDrosophila melanogaster (fruit fly) 142220147link
DPODrosophila pseudoobscura pseudoobscura 134213136link
AGAAnopheles gambiae (mosquito) 111190105link
AAGAedes aegypti (yellow fever mosquito) 109189102link
TCATribolium castaneum (red flour beetle) 10618296link
CELCaenorhabditis elegans (nematode) 134214132link
CBRCaenorhabditis briggsae 105180101link
BMYBrugia malayi (filaria) 9717792link
TADTrichoplax adhaerens 10617899link
ATHArabidopsis thaliana (thale cress) 137216125link
OSAOryza sativa japonica (Japanese rice) 131214125link
PPPPhyscomitrella patens subsp. patens 10418995link
OLUOstreococcus lucimarinus 118204123link
CREChlamydomonas reinhardtii 9818693link
CMECyanidioschyzon merolae 109193104link
SCESaccharomyces cerevisiae 109193104link
AGOAshbya gossypii (Eremothecium gossypii) 103192102link
KLAKluyveromyces lactis 109197107link
DHADebaryomyces hansenii 119207117link
PICPichia stipitis 121208126link
VPOVanderwaltozyma polyspora 8717083link
CALCandida albicans 9017682link
CGRCandida glabrata 105195103link
YLIYarrowia lipolytica 110200115link
SPOSchizosaccharomyces pombe 107198109link
NCRNeurospora crassa 117205115link
PANPodospora anserina 9417994link
MGRMagnaporthe grisea 127209131link
FGRFusarium graminearum 10618999link
ANIAspergillus nidulans 120206119link
AFMAspergillus fumigatus 133211134link
AORAspergillus oryzae 125210121link
ANGAspergillus niger 126212125link
NFINeosartorya fischeri 9818192link
SSLSclerotinia sclerotiorum 9518091link
BFUBotryotinia fuckeliana 9317593link
CNECryptococcus neoformans JEC21 116200111link
CNBCryptococcus neoformans B-3501A 9817790link
LBCLaccaria bicolor 9417588link
UMAUstilago maydis 122200112link
MGLMalassezia globosa 9517383link
ECUEncephalitozoon cuniculi 5312147link
MBRMonosiga brevicollis 9417684link
GLAGiardia lamblia 4413048link
DDIDictyostelium discoideum 111203112link
PFAPlasmodium falciparum 3D7 8817672link
PFDPlasmodium falciparum Dd2 5613560link
PFHPlasmodium falciparum HB3 6114967link
PYOPlasmodium yoelii 8116773link
PVXPlasmodium vivax 6413766link
TANTheileria annulata 6613770link
TPVTheileria parva 6613865link
CPVCryptosporidium parvum 6314758link
CHOCryptosporidium hominis 7216067link
TETTetrahymena thermophila 116203114link
PTMParamecium tetraurelia 8416985link
TBRTrypanosoma brucei 10118493link
TCRTrypanosoma cruzi 10319195link
LMALeishmania major 10718797link
EHIEntamoeba histolytica 8818077link
TVATrichomonas vaginalis 9618584link
ECOEscherichia coli K-12 MG1655 12515898link
ECJEscherichia coli K-12 W3110 12115797link
ECDEscherichia coli K-12 DH10B 9913889link
ECEEscherichia coli O157 EDL933 (EHEC) 12215896link
ECSEscherichia coli O157 Sakai (EHEC) 12315795link
ECFEscherichia coli O157 EC4115 (EHEC) 10014089link
ECCEscherichia coli CFT073 (UPEC) 11716196link
ECIEscherichia coli UTI89 (UPEC) 11616299link
ECPEscherichia coli 536 (UPEC) 11716294link
ECVEscherichia coli APEC O1 11415395link
ECWEscherichia coli E24377A 10414691link
ECXEscherichia coli HS 10114289link
ECMEscherichia coli SECEC 10014186link
ECYEscherichia coli SE11 10114189link
ECLEscherichia coli ATCC 8739 10114491link
STYSalmonella enterica subsp. enterica serovar Typhi CT18 11415997link
STTSalmonella enterica subsp. enterica serovar Typhi Ty2 11515696link
SPTSalmonella enterica subsp. enterica serovar Paratyphi A 11415695link
SEKSalmonella enterica subsp. enterica serovar Paratyphi A AKU12601 9913287link
SPQSalmonella enterica subsp. enterica serovar Paratyphi B 11415296link
SECSalmonella enterica subsp. enterica serovar Choleraesuis 11615995link
SEHSalmonella enterica subsp. enterica serovar Heidelberg 9913288link
SEESalmonella enterica subsp. enterica serovar Newport 9913288link
SEWSalmonella enterica subsp. enterica serovar Schwarzengrund 10113689link
SEASalmonella enterica subsp. enterica serovar Agona 10113390link
SEDSalmonella enterica subsp. enterica serovar Dublin 10013388link
SEGSalmonella enterica subsp. enterica serovar Gallinarum 9913288link
SETSalmonella enterica subsp. enterica serovar Enteritidis 9913288link
SESSalmonella enterica subsp. arizonae 9813186link
STMSalmonella typhimurium LT2 11615698link
YPEYersinia pestis CO92 11514994link
YPKYersinia pestis KIM 11515191link
YPMYersinia pestis Mediaevails 11815494link
YPAYersinia pestis Antiqua 11915895link
YPNYersinia pestis Nepal516 11615692link
YPPYersinia pestis Pestoides 11715094link
YPGYersinia pestis Angola 10013688link
YPSYersinia pseudotuberculosis IP32953 11815896link
YPIYersinia pseudotuberculosis IP31758 9913489link
YPYYersinia pseudotuberculosis YPIII 9713287link
YPBYersinia pseudotuberculosis PB1/+ 9713188link
YENYersinia enterocolitica 11516090link
SFLShigella flexneri 301 (serotype 2a) 11315094link
SFXShigella flexneri 2457T (serotype 2a) 11315094link
SFVShigella flexneri 8401 (serotype 5b) 11614994link
SSNShigella sonnei 12015997link
SBOShigella boydii Sb227 11515096link
SBCShigella boydii CDC 3083-94 11315294link
SDYShigella dysenteriae 11314888link
ECAErwinia carotovora 124167100link
ETAErwinia tasmaniensis 9813087link
PLUPhotorhabdus luminescens 11815798link
BUCBuchnera aphidicola APS 689554link
BASBuchnera aphidicola Sg 679451link
BABBuchnera aphidicola Bp 619352link
BCCBuchnera aphidicola Cc 487938link
WBRWigglesworthia glossinidia 7410553link
SGLSodalis glossinidius 9613285link
ENTEnterobacter sp. 638 11515992link
ESAEnterobacter sakazakii 10314188link
KPNKlebsiella pneumoniae 10814994link
KPEKlebsiella pneumoniae 342 10314592link
CKOCitrobacter koseri ATCC BAA-895 11215294link
SPESerratia proteamaculans 12615899link
PMRProteus mirabilis 9613283link
BFLCandidatus Blochmannia floridanus 739851link
BPNCandidatus Blochmannia pennsylvanicus 739852link
HINHaemophilus influenzae Rd KW20 (serotype d) 9613771link
HITHaemophilus influenzae 86-028NP (nontypeable) 8913773link
HIPHaemophilus influenzae PittEE 9013169link
HIQHaemophilus influenzae PittGG 8311564link
HDUHaemophilus ducreyi 8311966link
HSOHaemophilus somnus 129PT 9714073link
HSMHaemophilus somnus 2336 8210966link
PMUPasteurella multocida 9714179link
MSUMannheimia succiniciproducens 10113778link
APLActinobacillus pleuropneumoniae L20 (serotype 5b) 10414277link
APJActinobacillus pleuropneumoniae JL03 (serotype 3) 9112272link
APAActinobacillus pleuropneumoniae AP76 (serotype 7) 9312373link
ASUActinobacillus succinogenes 8912474link
XFAXylella fastidiosa 9a5c 10414281link
XFTXylella fastidiosa Temecula1 10214179link
XFMXylella fastidiosa M12 8611467link
XFNXylella fastidiosa M23 8811768link
XCCXanthomonas campestris pv. campestris ATCC 33913 129170106link
XCBXanthomonas campestris pv. campestris 8004 129169105link
XCAXanthomonas campestris pv. campestris B100 11615891link
XCVXanthomonas campestris pv. vesicatoria 128170108link
XACXanthomonas axonopodis 129169105link
XOOXanthomonas oryzae KACC10331 12216599link
XOMXanthomonas oryzae MAFF311018 12216498link
XOPXanthomonas oryzae PXO99A 10413781link
SMLStenotrophomonas maltophilia 10413883link
SMTStenotrophomonas maltophilia R551-3 10413782link
VCHVibrio cholerae O1 11515389link
VCOVibrio cholerae O395 11114988link
VVUVibrio vulnificus CMCP6 11615592link
VVYVibrio vulnificus YJ016 11815796link
VPAVibrio parahaemolyticus 11716596link
VHAVibrio harveyi 10514290link
VFIVibrio fischeri 11815795link
VFMVibrio fischeri MJ11 9713079link
PPRPhotobacterium profundum 12015594link
PAEPseudomonas aeruginosa PAO1 124162102link
PAUPseudomonas aeruginosa UCBPP-PA14 122162103link
PAPPseudomonas aeruginosa PA7 11014594link
PPUPseudomonas putida KT2440 12516699link
PPFPseudomonas putida F1 124161102link
PPGPseudomonas putida GB-1 10613985link
PPWPseudomonas putida W619 10814185link
PSTPseudomonas syringae pv. tomato DC3000 118162100link
PSBPseudomonas syringae pv. syringae B728a 122167102link
PSPPseudomonas syringae pv. phaseolicola 1448A 125170103link
PFLPseudomonas fluorescens Pf-5 125167102link
PFOPseudomonas fluorescens Pf0-1 122168104link
PENPseudomonas entomophila 127166102link
PMYPseudomonas mendocina 11515298link
PSAPseudomonas stutzeri 11615691link
CJACellvibrio japonicus 9312679link
PARPsychrobacter arcticum 11315686link
PCRPsychrobacter cryohalolentis 11315384link
PRWPsychrobacter sp. PRwf-1 10214277link
ACIAcinetobacter sp. ADP1 123158100link
ACBAcinetobacter baumannii ATCC 17978 11815697link
ABMAcinetobacter baumannii SDF 11715485link
ABYAcinetobacter baumannii AYE 12215798link
ABCAcinetobacter baumannii ACICU 9713081link
ABNAcinetobacter baumannii AB0057 9812982link
ABBAcinetobacter baumannii AB307-0294 9712982link
SONShewanella oneidensis 11715389link
SDNShewanella denitrificans 11615693link
SFRShewanella frigidimarina 11015391link
SAZShewanella amazonensis 118159101link
SBLShewanella baltica OS155 11315594link
SBMShewanella baltica OS185 9913378link
SBNShewanella baltica OS195 10013479link
SLOShewanella loihica 11215493link
SPCShewanella putrefaciens 11415395link
SSEShewanella sediminis 11815597link
SPLShewanella pealeana 10013782link
SHEShewanella sp. MR-4 11715898link
SHMShewanella sp. MR-7 11215495link
SHNShewanella sp. ANA-3 120158101link
SHWShewanella sp. W3-18-1 11115290link
SHLShewanella halifaxensis 10213882link
SWDShewanella woodyi ATCC 51908 10114084link
SWPShewanella piezotolerans WP3 10012980link
ILOIdiomarina loihiensis 10914779link
CPSColwellia psychrerythraea 11515993link
PHAPseudoalteromonas haloplanktis 12015896link
PATPseudoalteromonas atlantica 122161101link
SDESaccharophagus degradans 10414987link
MAQMarinobacter aquaeolei 11014793link
AMCAlteromonas macleodii 9913380link
PINPsychromonas ingrahamii 11515690link
CBUCoxiella burnetii RSA 493 9512874link
CBSCoxiella burnetii RSA 331 8211066link
CBDCoxiella burnetii Dugway 5J108-111 8211065link
CBGCoxiella burnetii CbuG_Q212 8211067link
CBCCoxiella burnetii CbuK_Q154 8310966link
LPNLegionella pneumophila Philadelphia 1 11015386link
LPFLegionella pneumophila Lens 11015785link
LPPLegionella pneumophila Paris 10915385link
LPCLegionella pneumophila Corby 11015886link
MCAMethylococcus capsulatus 9914386link
FTUFrancisella tularensis subsp. tularensis SCHU S4 10214880link
FTFFrancisella tularensis subsp. tularensis FSC 198 10414879link
FTWFrancisella tularensis subsp. tularensis WY96-3418 10714475link
FTLFrancisella tularensis subsp. holarctica LVS 10214579link
FTHFrancisella tularensis subsp. holarctica OSU18 10213976link
FTAFrancisella tularensis subsp. holarctica FTNF002-00 7911165link
FTNFrancisella tularensis subsp. novicida U112 9713874link
FTMFrancisella tularensis subsp. mediasiatica FSC147 8211663link
FPHFrancisella philomiragia 8811770link
TCXThiomicrospira crunogena 9613781link
NOCNitrosococcus oceani 11015690link
AEHAlkalilimnicola ehrlichei 11215087link
HHAHalorhodospira halophila 9913680link
HCHHahella chejuensis 11715998link
CSAChromohalobacter salexigens 11215292link
ABOAlcanivorax borkumensis 12015788link
MMWMarinomonas sp. MWYL1 10414084link
AHAAeromonas hydrophila 11915699link
ASAAeromonas salmonicida 11215593link
DNODichelobacter nodosus 8111564link
AFEAcidithiobacillus ferrooxidans ATCC 53993 8511768link
BCIBaumannia cicadellinicola 649850link
CRPCandidatus Carsonella ruddii 264019link
RMACandidatus Ruthia magnifica 7911063link
VOKCandidatus Vesicomyosocius okutanii 7710463link
NMENeisseria meningitidis MC58 (serogroup B) 9413273link
NMANeisseria meningitidis Z2491 (serogroup A) 9413274link
NMCNeisseria meningitidis FAM18 (serogroup C) 9513475link
NMNNeisseria meningitidis 053442 (serogroup C) 8511767link
NGONeisseria gonorrhoeae 9313173link
NGKNeisseria gonorrhoeae NCCP11945 8411765link
CVIChromobacterium violaceum 12616498link
RSORalstonia solanacearum 132170104link
RPIRalstonia pickettii 10814887link
REURalstonia eutropha JMP134 130172108link
REHRalstonia eutropha H16 131175121link
RMERalstonia metallidurans 129171106link
CTICupriavidus taiwanensis 10614891link
BMABurkholderia mallei ATCC 23344 126166106link
BMVBurkholderia mallei SAVP1 126166106link
BMLBurkholderia mallei NCTC 10229 126165106link
BMNBurkholderia mallei NCTC 10247 126166106link
BXEBurkholderia xenovorans 132173120link
BVIBurkholderia vietnamiensis 124166111link
BURBurkholderia sp. 383 130170121link
BCNBurkholderia cenocepacia AU1054 125165109link
BCHBurkholderia cenocepacia HI2424 126166109link
BCMBurkholderia cenocepacia MC0-3 10914793link
BCJBurkholderia cenocepacia J2315 10914893link
BAMBurkholderia cepacia 125162112link
BACBurkholderia ambifaria MC40-6 10914795link
BMUBurkholderia multivorans ATCC 17616 (JGI) 11615093link
BMJBurkholderia multivorans ATCC 17616 (Tohoku) 10814393link
BPSBurkholderia pseudomallei K96243 130170111link
BPMBurkholderia pseudomallei 1710b 130169112link
BPLBurkholderia pseudomallei 1106a 131169111link
BPDBurkholderia pseudomallei 668 130170114link
BTEBurkholderia thailandensis 129169111link
BPHBurkholderia phymatum 11214797link
BPYBurkholderia phytofirmans 11114897link
PNUPolynucleobacter sp. QLW-P1DMWA-1 10413583link
PNEPolynucleobacter necessarius 8611166link
BPEBordetella pertussis 11816295link
BPABordetella parapertussis 119164100link
BBRBordetella bronchiseptica 121166102link
BPTBordetella petrii 10414088link
BAVBordetella avium 10314086link
RFRRhodoferax ferrireducens 123167101link
POLPolaromonas sp. JS666 124168101link
PNAPolaromonas naphthalenivorans 122163102link
AAVAcidovorax avenae 11816198link
AJSAcidovorax sp. JS42 12016593link
VEIVerminephrobacter eiseniae 124168105link
DACDelftia acidovorans 10813892link
MPTMethylibium petroleiphilum 12716499link
HARHerminiimonas arsenicoxydans 11315794link
MMSMinibacterium massiliensis 9613476link
LCHLeptothrix cholodnii 10714590link
NEUNitrosomonas europaea 10415285link
NETNitrosomonas eutropha 10514685link
NMUNitrosospira multiformis 10714987link
EBAAzoarcus sp. EbN1 11216393link
AZOAzoarcus sp. BH72 130165105link
DARDechloromonas aromatica 12316698link
TBDThiobacillus denitrificans 10614784link
MFAMethylobacillus flagellatus 11015182link
HPYHelicobacter pylori 26695 9012668link
HPJHelicobacter pylori J99 8612365link
HPAHelicobacter pylori HPAG1 9413070link
HPSHelicobacter pylori Shi470 7310963link
HPGHelicobacter pylori G27 7310963link
HPPHelicobacter pylori P12 7210963link
HHEHelicobacter hepaticus 8912971link
HACHelicobacter acinonychis 8812767link
WSUWolinella succinogenes 9013172link
TDNThiomicrospira denitrificans 8412865link
CJECampylobacter jejuni NCTC11168 8712974link
CJRCampylobacter jejuni RM1221 8712872link
CJJCampylobacter jejuni 81-176 9012976link
CJUCampylobacter jejuni 81116 8011570link
CJDCampylobacter jejuni subsp. doylei 269.97 8111765link
CFFCampylobacter fetus 10014677link
CCVCampylobacter curvus 9213770link
CHACampylobacter hominis ATCC BAA-381 8712768link
CCOCampylobacter concisus 13826 7611466link
ABUArcobacter butzleri 8212168link
NISNitratiruptor sp. SB155-2 7810563link
SUNSulfurovum sp. NBC37-1 8512572link
GSUGeobacter sulfurreducens 10213983link
GMEGeobacter metallireducens 10414894link
GURGeobacter uraniumreducens 10914890link
GLOGeobacter lovleyi 8712975link
GBMGeobacter bemidjiensis 8812379link
PCAPelobacter carbinolicus 10814387link
PPDPelobacter propionicus 9413983link
DVUDesulfovibrio vulgaris Hildenborough 10113883link
DVLDesulfovibrio vulgaris DP4 10013783link
DDEDesulfovibrio desulfuricans 10615089link
LIPLawsonia intracellularis 7410665link
BBABdellovibrio bacteriovorus 11516294link
DPSDesulfotalea psychrophila 9813180link
DOLCandidatus Desulfococcus oleovorans 8811271link
ADEAnaeromyxobacter dehalogenans 10714590link
AFWAnaeromyxobacter sp. Fw109-5 9713082link
ANKAnaeromyxobacter sp. K 9512782link
MXAMyxococcus xanthus 11415096link
SCLSorangium cellulosum 10414089link
SATSyntrophus aciditrophicus 10314281link
SFUSyntrophobacter fumaroxidans 10513781link
RPRRickettsia prowazekii 669946link
RTYRickettsia typhi 6910951link
RCORickettsia conorii 6910651link
RFERickettsia felis 7811554link
RBERickettsia bellii RML369-C 7010854link
RBORickettsia bellii OSU 85-389 569449link
RAKRickettsia akari 589548link
RCMRickettsia canadensis 569346link
RRIRickettsia rickettsii Sheila Smith 589549link
RRJRickettsia rickettsii Iowa 589549link
RMSRickettsia massiliae 579548link
OTSOrientia tsutsugamushi Boryong 488941link
OTTOrientia tsutsugamushi Ikeda 448140link
WOLWolbachia wMel 6610253link
WBMWolbachia wBm 6210050link
WPIWolbachia pipientis 569050link
AMAAnaplasma marginale 6610553link
APHAnaplasma phagocytophilum 669851link
ERUEhrlichia ruminantium Welgevonden (South Africa) 6710651link
ERWEhrlichia ruminantium Welgevonden (France) 6610750link
ERGEhrlichia ruminantium Gardel 6410149link
ECNEhrlichia canis 6510250link
ECHEhrlichia chaffeensis 6710050link
NSENeorickettsia sennetsu 589248link
PUBCandidatus Pelagibacter ubique 10614277link
MLOMesorhizobium loti 129171106link
MESMesorhizobium sp. BNC1 11716294link
PLAParvibaculum lavamentivorans 10313585link
SMESinorhizobium meliloti 129170107link
SMDSinorhizobium medicae 10515091link
ATUAgrobacterium tumefaciens C58 (UWash/Dupont) 12616599link
ATCAgrobacterium tumefaciens C58 (Cereon) 126167101link
RETRhizobium etli CFN 42 134177112link
RECRhizobium etli CIAT 652 10614992link
RLERhizobium leguminosarum 137174122link
RLTRhizobium leguminosarum bv. trifolii WSM2304 10714489link
BMEBrucella melitensis 16M 12316195link
BMFBrucella melitensis biovar Abortus 12015987link
BMBBrucella abortus 9-941 11615788link
BMCBrucella abortus S19 9913181link
BMSBrucella suis 1330 11515488link
BMTBrucella suis ATCC 23445 9312479link
BOVBrucella ovis 11515185link
BCSBrucella canis 9913182link
OANOchrobactrum anthropi 10413888link
BJABradyrhizobium japonicum 126172110link
BRABradyrhizobium sp. ORS278 133175120link
BBTBradyrhizobium sp. BTAi1 131176121link
RPARhodopseudomonas palustris CGA009 125169103link
RPBRhodopseudomonas palustris HaA2 12016299link
RPCRhodopseudomonas palustris BisB18 11916498link
RPDRhodopseudomonas palustris BisB5 12016096link
RPERhodopseudomonas palustris BisA53 124167102link
RPTRhodopseudomonas palustris TIE-1 10414388link
NWINitrobacter winogradskyi 11115993link
NHANitrobacter hamburgensis 11215790link
OCAOligotropha carboxidovorans 9913381link
BHEBartonella henselae 8712061link
BQUBartonella quintana 8411659link
BBKBartonella bacilliformis 8612159link
BTRBartonella tribocorum 9113061link
XAUXanthobacter autotrophicus 10614189link
AZCAzorhizobium caulinodans 10514388link
MEXMethylobacterium extorquens 9813682link
MRDMethylobacterium radiotolerans 10114290link
METMethylobacterium sp. 4-46 10114087link
MPOMethylobacterium populi 9813782link
BIDBeijerinckia indica 9714083link
CCRCaulobacter crescentus 12015897link
CAKCaulobacter sp. K31 10614192link
PZUPhenylobacterium zucineum 10113385link
SILSilicibacter pomeroyi 11816294link
SITSilicibacter sp. TM1040 12416297link
RSPRhodobacter sphaeroides 2.4.1 130169101link
RSHRhodobacter sphaeroides ATCC 17029 11516197link
RSQRhodobacter sphaeroides ATCC 17025 12016499link
JANJannaschia sp. CCS1 11816296link
RDERoseobacter denitrificans 131174104link
PDEParacoccus denitrificans 11815897link
DSHDinoroseobacter shibae 12016297link
MMRMaricaulis maris 11315487link
HNEHyphomonas neptunium 11616193link
ZMOZymomonas mobilis 10314279link
NARNovosphingobium aromaticivorans 11815790link
SALSphingopyxis alaskensis 11215585link
SWISphingomonas wittichii 10514589link
ELIErythrobacter litoralis 10914380link
GOXGluconobacter oxydans 10815088link
GBEGranulobacter bethesdensis 11316396link
ACRAcidiphilium cryptum JF-5 11515996link
GDIGluconacetobacter diazotrophicus PAl 5 (Brazil) 10113881link
RRURhodospirillum rubrum 12016499link
RCERhodospirillum centenum 9613682link
MAGMagnetospirillum magneticum 10914892link
MGMMagnetococcus sp. MC-1 9614681link
ABAAcidobacteria bacterium 11614992link
SUSSolibacter usitatus 12016195link
SWOSyntrophomonas wolfei 8311269link
CSCCaldicellulosiruptor saccharolyticus 8812874link
BSUBacillus subtilis 11915798link
BHABacillus halodurans 11315794link
BANBacillus anthracis Ames 11515196link
BARBacillus anthracis Ames 0581 11114996link
BAABacillus anthracis A2012 11515095link
BATBacillus anthracis Sterne 11515196link
BCEBacillus cereus ATCC 14579 11115098link
BCABacillus cereus ATCC 10987 12015496link
BCZBacillus cereus ZK 118156100link
BCYBacillus cereus subsp. cytotoxis NVH 391-98 9312576link
BTKBacillus thuringiensis 97-27 11415097link
BTLBacillus thuringiensis Al Hakam 11915496link
BWEBacillus weihenstephanensis 9613078link
BLIBacillus licheniformis ATCC 14580 11815495link
BLDBacillus licheniformis DSM13 12015696link
BCLBacillus clausii 11916199link
BAYBacillus amyloliquefaciens 9613987link
BPUBacillus pumilus 9413680link
OIHOceanobacillus iheyensis 11015292link
GKAGeobacillus kaustophilus 10515391link
GTNGeobacillus thermodenitrificans 11415291link
AFLAnoxybacillus flavithermus 8612372link
LSPLysinibacillus sphaericus 9212978link
ESIExiguobacterium sibiricum 8912873link
SAUStaphylococcus aureus N315 10114177link
SAVStaphylococcus aureus Mu50 10114077link
SAWStaphylococcus aureus Mu3 8412272link
SAMStaphylococcus aureus MW2 10114077link
SARStaphylococcus aureus MRSA252 10113677link
SASStaphylococcus aureus MSSA476 10213777link
SACStaphylococcus aureus COL 10013980link
SABStaphylococcus aureus RF122 10414379link
SAAStaphylococcus aureus USA300 10914383link
SAXStaphylococcus aureus USA300 TCH1516 8312173link
SAOStaphylococcus aureus NCTC8325 10114078link
SAJStaphylococcus aureus JH9 10013678link
SAHStaphylococcus aureus JH1 10013779link
SAEStaphylococcus aureus Newman 9713677link
SEPStaphylococcus epidermidis ATCC 12228 9713674link
SERStaphylococcus epidermidis RP62A 9814176link
SHAStaphylococcus haemolyticus 9513575link
SSPStaphylococcus saprophyticus 10614179link
LMOListeria monocytogenes EGD-e 10013578link
LMFListeria monocytogenes F2365 9913276link
LINListeria innocua 9813374link
LWEListeria welshimeri SLCC5334 10514279link
LLALactococcus lactis subsp. lactis IL1403 9513074link
LLCLactococcus lactis subsp. cremoris SK11 9713471link
LLMLactococcus lactis subsp. cremoris MG1363 10314383link
SPYStreptococcus pyogenes SF370 (serotype M1) 8912667link
SPZStreptococcus pyogenes MGAS5005 (serotype M1) 9713874link
SPMStreptococcus pyogenes MGAS8232 (serotype M18) 9112869link
SPGStreptococcus pyogenes MGAS315 (serotype M3) 9112970link
SPSStreptococcus pyogenes SSI-1 (serotype M3) 9012969link
SPHStreptococcus pyogenes MGAS10270 (serotype M3) 9614074link
SPIStreptococcus pyogenes MGAS10750 (serotype M3) 9513674link
SPJStreptococcus pyogenes MGAS2096 (serotype M3) 9613572link
SPKStreptococcus pyogenes MGAS9429 (serotype M3) 9513871link
SPFStreptococcus pyogenes Manfredo (serotype M5) 9413370link
SPAStreptococcus pyogenes MGAS10394 (serotype M6) 9613873link
SPBStreptococcus pyogenes MGAS6180 (serotype M28) 9613874link
SOZStreptococcus pyogenes NZ131 (serotype M49) 8011561link
SPNStreptococcus pneumoniae TIGR4 9313374link
SPRStreptococcus pneumoniae R6 9613877link
SPDStreptococcus pneumoniae D39 9613876link
SPVStreptococcus pneumoniae Hungary19A 6 9113075link
SPWStreptococcus pneumoniae CGSP14 9213070link
SPXStreptococcus pneumoniae G54 8111565link
SAGStreptococcus agalactiae 2603 (serotype V) 8813271link
SANStreptococcus agalactiae NEM316 (serotype III) 9013373link
SAKStreptococcus agalactiae A909 (serotype Ia) 9113172link
SMUStreptococcus mutans 8512473link
STCStreptococcus thermophilus CNRZ1066 8313071link
STLStreptococcus thermophilus LMG18311 8412871link
STEStreptococcus thermophilus LMD-9 8413069link
SSAStreptococcus sanguinis 9513980link
SSUStreptococcus suis 05ZYH33 9213372link
SSVStreptococcus suis 98HAH33 9213371link
SGOStreptococcus gordonii 8912974link
SEZStreptococcus equi 7711562link
LPLLactobacillus plantarum 10414581link
LJOLactobacillus johnsonii 8312361link
LACLactobacillus acidophilus 8112357link
LSALactobacillus sakei 9113572link
LSLLactobacillus salivarius 9713971link
LDBLactobacillus delbrueckii ATCC 11842 7711257link
LBULactobacillus delbrueckii ATCC BAA-365 7811458link
LBRLactobacillus brevis 9513871link
LCALactobacillus casei ATCC 334 10013573link
LCBLactobacillus casei BL23 8311266link
LGALactobacillus gasseri 8011958link
LRELactobacillus reuteri F275 (JGI) 8912670link
LRFLactobacillus reuteri F275 (Kitasato) 7410360link
LHELactobacillus helveticus 638953link
LFELactobacillus fermentum 7410764link
PPEPediococcus pentosaceus 6610153link
EFAEnterococcus faecalis 9413474link
OOEOenococcus oeni 8512068link
LMELeuconostoc mesenteroides 8712570link
LCILeuconostoc citreum 7510964link
STHSymbiobacterium thermophilum 10414282link
CACClostridium acetobutylicum 10214284link
CPEClostridium perfringens 13 9113371link
CPFClostridium perfringens ATCC 13124 8912970link
CPRClostridium perfringens SM101 8512564link
CTCClostridium tetani E88 10013977link
CNOClostridium novyi 8611967link
CTHClostridium thermocellum 9112872link
CDFClostridium difficile 9312874link
CBOClostridium botulinum A ATCC 3502 8411668link
CBAClostridium botulinum A ATCC 19397 8311368link
CBHClostridium botulinum A Hall 8311368link
CBLClostridium botulinum A3 Loch Maree 8111571link
CBKClostridium botulinum B Eklund 17B 8311476link
CBBClostridium botulinum B1 Okra 8511471link
CBTClostridium botulinum E3 8811875link
CBFClostridium botulinum F Langeland 8311369link
CBEClostridium beijerinckii 9413077link
CKLClostridium kluyveri 9813878link
CPYClostridium phytofermentans 8612672link
AMTAlkaliphilus metalliredigens 9313076link
AOEAlkaliphilus oremlandii 7110265link
CHYCarboxydothermus hydrogenoformans 9713581link
DSYDesulfitobacterium hafniense 11015892link
DRMDesulfotomaculum reducens 9513379link
PTHPelotomaculum thermopropionicum 9012876link
DAUCandidatus Desulforudis audaxviator 7910765link
HMOHeliobacterium modesticaldum 8411876link
FMAFinegoldia magna 8110862link
TTEThermoanaerobacter tengcongensis 9613072link
TEXThermoanaerobacter sp. X514 8111067link
TPDThermoanaerobacter pseudethanolicus 8211168link
MTAMoorella thermoacetica 9213178link
NTHNatranaerobius thermophilus 7811068link
CPOCoprothermobacter proteolyticus 749859link
MGEMycoplasma genitalium 487333link
MPNMycoplasma pneumoniae 446734link
MPUMycoplasma pulmonis 497437link
MPEMycoplasma penetrans 6910346link
MGAMycoplasma gallisepticum 518337link
MMYMycoplasma mycoides 568242link
MMOMycoplasma mobile 528139link
MHYMycoplasma hyopneumoniae 232 477435link
MHJMycoplasma hyopneumoniae J 477535link
MHPMycoplasma hyopneumoniae 7448 477535link
MSYMycoplasma synoviae 507537link
MCPMycoplasma capricolum 527140link
MAAMycoplasma agalactiae 548138link
MATMycoplasma arthritidis 366229link
UURUreaplasma parvum serovar 3 ATCC 700970 406432link
UPAUreaplasma parvum serovar 3 ATCC 27815 376229link
UUEUreaplasma urealyticum serovar 10 ATCC 33699 376229link
POYPhytoplasma OY 336328link
AYWPhytoplasma AYWB 346528link
PMLCandidatus Phytoplasma mali 325824link
PALCandidatus Phytoplasma australiense 326326link
ACLAcholeplasma laidlawii 639549link
MFLMesoplasma florum 467234link
MTUMycobacterium tuberculosis H37Rv 119159102link
MTCMycobacterium tuberculosis CDC1551 12015897link
MRAMycobacterium tuberculosis H37Ra 11615996link
MTFMycobacterium tuberculosis F11 9413780link
MBOMycobacterium bovis AF2122/97 122159103link
MBBMycobacterium bovis BCG Pasteur 1173P2 122159101link
MLEMycobacterium leprae 9713376link
MPAMycobacterium avium paratuberculosis 119154100link
MAVMycobacterium avium 104 127163109link
MSMMycobacterium smegmatis 129159117link
MULMycobacterium ulcerans 117158101link
MVAMycobacterium vanbaalenii 117163104link
MGIMycobacterium gilvum 120167100link
MABMycobacterium abscessus ATCC 19977T 10013380link
MMCMycobacterium sp. MCS 11915695link
MKMMycobacterium sp. KMS 11715593link
MJLMycobacterium sp. JLS 122161103link
MMIMycobacterium marinum M 10013888link
CGLCorynebacterium glutamicum ATCC 13032 (Kyowa Hakko) 10914889link
CGBCorynebacterium glutamicum ATCC 13032 (Bielefeld) 10814888link
CGTCorynebacterium glutamicum R 10714688link
CEFCorynebacterium efficiens 10614581link
CDICorynebacterium diphtheriae 9513177link
CJKCorynebacterium jeikeium 9713075link
CURCorynebacterium urealyticum 8411366link
NFANocardia farcinica 9115597link
RHARhodococcus sp. RHA1 130169118link
SCOStreptomyces coelicolor 134167105link
SMAStreptomyces avermitilis 127170102link
SGRStreptomyces griseus 10414784link
TWHTropheryma whipplei Twist 7110653link
TWSTropheryma whipplei TW08/27 7110653link
LXXLeifsonia xyli xyli CTCB07 10113773link
CMIClavibacter michiganensis subsp. michiganensis 10914182link
CMSClavibacter michiganensis subsp. sepedonicus 8711772link
ARTArthrobacter sp. FB24 11014084link
AAUArthrobacter aurescens 123157100link
RSARenibacterium salmoninarum 9011875link
KRHKocuria rhizophila 10413584link
PACPropionibacterium acnes 9513477link
NCANocardioides sp. JS614 11814793link
TFUThermobifida fusca 11215188link
FRAFrankia sp. CcI3 116163104link
FREFrankia sp. EAN1pec 10014386link
FALFrankia alni 117161100link
ACEAcidothermus cellulolyticus 10513579link
KRAKineococcus radiotolerans 9513182link
SENSaccharopolyspora erythraea 130169113link
STPSalinispora tropica 11815692link
SAQSalinispora arenicola 9714183link
BLOBifidobacterium longum NCC2705 8812369link
BLJBifidobacterium longum DJO10A 7910862link
BLNBifidobacterium longum subsp. infantis ATCC 15697 8110863link
BADBifidobacterium adolescentis 8411768link
RXYRubrobacter xylanophilus 11215189link
FNUFusobacterium nucleatum 9113576link
RBARhodopirellula baltica 12315495link
OTEOpitutus terrae 8912577link
MINMethylacidiphilum infernorum 8010970link
AMUAkkermansia muciniphila 7812169link
CTRChlamydia trachomatis D/UW-3/CX (serovar D) 6710153link
CTAChlamydia trachomatis A/HAR-13 (serovar A) 6910454link
CTBChlamydia trachomatis 434/Bu 599246link
CTLChlamydia trachomatis L2b/UCH-1/proctitis 599246link
CMUChlamydia muridarum 669952link
CPNChlamydophila pneumoniae CWL029 6910253link
CPAChlamydophila pneumoniae AR39 6910253link
CPJChlamydophila pneumoniae J138 6910253link
CPTChlamydophila pneumoniae TW183 6910253link
CCAChlamydophila caviae 6910253link
CABChlamydophila abortus 6810253link
CFEChlamydophila felis 6910253link
PCUCandidatus Protochlamydia amoebophila 7411763link
BBUBorrelia burgdorferi 529045link
BGABorrelia garinii 659745link
BAFBorrelia afzelii 618945link
BTUBorrelia turicatae 538345link
BHRBorrelia hermsii 548447link
BDUBorrelia duttonii 538445link
BREBorrelia recurrentis 528344link
TPATreponema pallidum subsp. pallidum Nichols 528043link
TPPTreponema pallidum subsp. pallidum SS14 527944link
TDETreponema denticola 8312171link
LILLeptospira interrogans serovar lai 11014887link
LICLeptospira interrogans serovar Copenhageni 10715183link
LBJLeptospira borgpetersenii JB197 9112775link
LBLLeptospira borgpetersenii L550 9312874link
LBILeptospira biflexa serovar Patoc Patoc 1 (Paris) 8711873link
LBFLeptospira biflexa serovar Patoc Patoc 1 (Ames) 8611673link
SYNSynechocystis sp. PCC6803 10714886link
SYWSynechococcus sp. WH8102 9314380link
SYCSynechococcus elongatus PCC6301 9914282link
SYFSynechococcus elongatus PCC7942 10614486link
SYDSynechococcus sp. CC9605 10214485link
SYESynechococcus sp. CC9902 9213881link
SYGSynechococcus sp. CC9311 10415086link
SYRSynechococcus sp. RCC307 9814280link
SYXSynechococcus sp. WH7803 10014787link
SYPSynechococcus sp. PCC7002 9413180link
CYACyanobacteria Yellowstone A-Prime 9113377link
CYBCyanobacteria Yellowstone B-Prime 9513777link
TELThermosynechococcus elongatus 9213779link
MARMicrocystis aeruginosa 8812070link
CYTCyanothece sp. ATCC 51142 8712476link
GVIGloeobacter violaceus 10214188link
ANAAnabaena sp. PCC7120 11015189link
NPUNostoc punctiforme 9413183link
AVAAnabaena variabilis 116159101link
PMAProchlorococcus marinus SS120 8713073link
PMMProchlorococcus marinus MED4 9012974link
PMTProchlorococcus marinus MIT9313 9813979link
PMNProchlorococcus marinus NATL2A 9013173link
PMIProchlorococcus marinus MIT9312 8912871link
PMBProchlorococcus marinus AS9601 9212777link
PMCProchlorococcus marinus MIT 9515 8812275link
PMFProchlorococcus marinus MIT 9303 9513782link
PMGProchlorococcus marinus MIT 9301 9513279link
PMHProchlorococcus marinus MIT 9215 7510364link
PMJProchlorococcus marinus MIT 9211 7410065link
PMEProchlorococcus marinus NATL1A 9113176link
TERTrichodesmium erythraeum 10214488link
AMRAcaryochloris marina 9513781link
BTHBacteroides thetaiotaomicron 10114283link
BFRBacteroides fragilis YCH46 10114080link
BFSBacteroides fragilis NCTC9343 9813778link
BVUBacteroides vulgatus 9013372link
PGIPorphyromonas gingivalis W83 8812767link
PGNPorphyromonas gingivalis ATCC 33277 7110159link
PDIParabacteroides distasonis 8212572link
APSCandidatus Azobacteroides pseudotrichonymphae 6810055link
SRUSalinibacter ruber 11014681link
CHUCytophaga hutchinsonii 11315888link
GFOGramella forsetii 11315493link
FJOFlavobacterium johnsoniae 11515594link
FPSFlavobacterium psychrophilum 8311770link
SMGCandidatus Sulcia muelleri 314321link
AASCandidatus Amoebophilus asiaticus 528043link
CTEChlorobaculum tepidum 9813376link
CPCChlorobaculum parvum NCIB 8327 7910869link
CCHChlorobium chlorochromatii 9313078link
CPHChlorobium phaeobacteroides DSM 266 9513680link
CPBChlorobium phaeobacteroides BS1 8211671link
CLIChlorobium limicola 8411173link
PVIProsthecochloris vibrioformis 9013178link
PLTPelodictyon luteolum 8712576link
PPHPelodictyon phaeoclathratiforme 8311173link
CTSChloroherpeton thalassium 8311971link
PAAProsthecochloris aestuarii 8110969link
DETDehalococcoides ethenogenes 6910161link
DEHDehalococcoides sp. CBDB1 6810062link
DEBDehalococcoides sp. BAV1 7010667link
RRSRoseiflexus sp. RS-1 9314279link
RCARoseiflexus castenholzii DSM13941 9314382link
CAUChloroflexus aurantiacus 9413380link
HAUHerpetosiphon aurantiacus 8713380link
EMIElusimicrobium minutum 7510162link
RSDUncultured Termite group 1 bacterium phylotype Rs-D17 659954link
DRADeinococcus radiodurans 9814381link
DGEDeinococcus geothermalis 10614482link
TTHThermus thermophilus HB27 10514477link
TTJThermus thermophilus HB8 10314477link
AAEAquifex aeolicus 9212473link
HYAHydrogenobaculum sp. Y04AAS1 7610565link
SULSulfurihydrogenibium sp. YO3AOP1 7510565link
TMAThermotoga maritima 8712368link
TPTThermotoga petrophila 9012570link
TLEThermotoga lettingae 7710666link
TRQThermotoga sp. RQ2 7810666link
TMEThermosipho melanesiensis 7910763link
FNOFervidobacterium nodosum 7610661link
PMOPetrotoga mobilis 8311168link
DTHDictyoglomus thermophilum 7610464link
TYEThermodesulfovibrio yellowstonii 7710465link
MJAMethanococcus jannaschii 7310160link
MMPMethanococcus maripaludis S2 7810964link
MMQMethanococcus maripaludis C5 7310266link
MMXMethanococcus maripaludis C6 649256link
MMZMethanococcus maripaludis C7 639358link
MAEMethanococcus aeolicus 668950link
MVNMethanococcus vannielii 649658link
MACMethanosarcina acetivorans 9012571link
MBAMethanosarcina barkeri 9112474link
MMAMethanosarcina mazei 9713178link
MBUMethanococcoides burtonii 7910669link
MTPMethanosaeta thermophila 699356link
MHUMethanospirillum hungatei 7710768link
MLAMethanocorpusculum labreanum 689951link
MEMMethanoculleus marisnigri 7810468link
MBNCandidatus Methanoregula boonei 709464link
MTHMethanobacterium thermoautotrophicum 7610462link
MSTMethanosphaera stadtmanae 709661link
MSIMethanobrevibacter smithii ATCC 35061 679055link
MKAMethanopyrus kandleri 659152link
AFUArchaeoglobus fulgidus 8411766link
HALHalobacterium sp. NRC-1 8711862link
HSLHalobacterium salinarum R1 719850link
HMAHaloarcula marismortui 9913978link
HWAHaloquadratum walsbyi 9913171link
NPHNatronomonas pharaonis 9713870link
TACThermoplasma acidophilum 8412261link
TVOThermoplasma volcanium 8412364link
PTOPicrophilus torridus 9313367link
PHOPyrococcus horikoshii 8011457link
PABPyrococcus abyssi 7911859link
PFUPyrococcus furiosus 8312261link
TKOThermococcus kodakaraensis 8111960link
TONThermococcus onnurineus 649055link
RCIUncultured methanogenic archaeon RC-I 8911471link
APEAeropyrum pernix 8613060link
SMRStaphylothermus marinus 7811160link
IHOIgnicoccus hospitalis 619052link
HBUHyperthermus butylicus 7410554link
SSOSulfolobus solfataricus 10213474link
STOSulfolobus tokodaii 9713268link
SAISulfolobus acidocaldarius 9613268link
MSEMetallosphaera sedula 9312569link
PAIPyrobaculum aerophilum 8111960link
PISPyrobaculum islandicum 8211662link
PCLPyrobaculum calidifontis 8411564link
PASPyrobaculum arsenaticum 8611565link
CMACaldivirga maquilingensis 699955link
TNEThermoproteus neutrophilus 689553link
TPEThermofilum pendens 7811760link
NMRNitrosopumilus maritimus 639653link
NEQNanoarchaeum equitans 264923link
KCRCandidatus Korarchaeum cryptofilum 659054link