Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  C5527333 strand: - 1015-1126 ref: 1012-1127

Variable:  C5527333 strand: - 1358-1469 alnlen 111 mutations 10 involve-A 10 involve-T 0

TTGCCCTGTTCGGTGGCAACCGTGGCAACGGGTCGAAGTGCGGTTTGTCGTACTGGAATGTGAACAACCCTGCGACGAACGTGAACACGAACATCGTGGCGAGCCAATCTT (Template)
TTGCCCTGTTCGGTGGCGTCCGTGGCAACGGGTCGAGGTGCGGTTTGTCGTACTGGGATGTGAACAACCCTGCGACGTACGTGAGCACGGACGTCGTGGCGAGCCTTTCTT (Variable)