Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS011586_WUGC_scaffold_7434 strand: + 6562-6673 ref: 6562-6673

Variable:  SRS011586_WUGC_scaffold_7434 strand: + 6348-6459 alnlen 111 mutations 14 involve-A 14 involve-T 0

TGTTCCAACACGGCGGTAATTGGAATAATGGGTCGAATTGCGGTCTCTTTACGGCTAATTTGAACAACACTTCGTCTAATTCCAACACGAACATTGGCTCTCGCCTACTTT (Template)
TGTTCCTACTCGGCGGTAATTGGCGTGATGGGTCGCTTTGCGGTCTCTTTACGGCTATTTTGGACTACACTTCGTCTATTTCCTACACGATCATTGGCTCTCGCCTGCTTT (Variable)