Template:  SRS013687_Baylor_scaffold_54985 strand: + 25405-25521 ref: 25405-25521
Variable:  SRS013687_Baylor_scaffold_54985 strand: + 24791-24907 alnlen 116 mutations 17 involve-A 17 involve-T 0

25405      TGGTGTCCTGTTCAGCGGTAACGCGAATAACAGTGCGAATGCAGGTCTCGCTTATGCGAATTCGACTAACACCCCCTCGAATACGAATGCGAACATCGGTTCTCACCTATGCTTTA 
           ::::::::::::: ::::: ::::: ::::: ::::: :::: :::::::::::::::  ::::::: :: ::::::::::: ::  :::: :: ::::::::: ::: :::::::
24791      TGGTGTCCTGTTCGGCGGTTACGCGGATAACGGTGCGTATGCGGGTCTCGCTTATGCGCGTTCGACTTACGCCCCCTCGAATTCGTCTGCGCACGTCGGTTCTCGCCTTTGCTTTA