Template:  SRS015893_WUGC_scaffold_42257 strand: + 38906-39017 ref: 38906-39017
Variable:  SRS015893_WUGC_scaffold_42257 strand: + 14323-14434 alnlen 111 mutations 10 involve-A 9 involve-T 0

38906      GCGGTGTGTGTTGCGTGCTTGTAACAATGCGAATGCGAATGGAGGTCTCGTTTATGCGAATGCGAATGACGCTTCTACGAATTCGAATACGAACGTCGGTGCCCGTCTTGC 
           ::::::::::::::::::::::  : ::::: ::::: :::::::::::::::::::::::::  ::::::::::::::: ::::: :::: :::::::::::::::::::
14323      GCGGTGTGTGTTGCGTGCTTGTGGCGATGCGTATGCGTATGGAGGTCTCGTTTATGCGAATGCTCATGACGCTTCTACGAGTTCGAGTACGTACGTCGGTGCCCGTCTTGC 
Template:  SRS015893_WUGC_scaffold_42257 strand: + 38906-39017 ref: 38906-39017
Variable:  SRS015893_WUGC_scaffold_42257 strand: + 38673-38784 alnlen 111 mutations 15 involve-A 15 involve-T 0

38906      GCGGTGTGTGTTGCGTGCTTGTAACAATGCGAATGCGAATGGAGGTCTCGTTTATGCGAATGCGAATGACGCTTCTACGAATTCGAATACGAACGTCGGTGCCCGTCTTGC 
           ::::::::::::::::::::::: :: ::::  ::::: ::: :::::::::: :::: ::::: ::: :::::::::: :::::  ::::  ::::::::::::::::::
38673      GCGGTGTGTGTTGCGTGCTTGTAGCAGTGCGTGTGCGAGTGGGGGTCTCGTTTTTGCGTATGCGTATGGCGCTTCTACGGATTCGGTTACGGGCGTCGGTGCCCGTCTTGC