Template:  SRS015960_WUGC_scaffold_31981 strand: - 5531-5645 ref: 5532-5646
Variable:  SRS015960_WUGC_scaffold_31981 strand: - 5729-5843 alnlen 114 mutations 20 involve-A 20 involve-T 0

5645       GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (revcomp)
           ::::::::::::: ::::: ::::: :: :::::: :: ::: :::::::::: :::::::::: ::  : ::::::::::: ::  :::: ::::: :::::: ::: :: ::
5843       GGGTGTCCTTTTCGGCGGTTATACGCATTATGGCGGTCTTGCGGGCTTCGGTTTTGCGAATACGTATGCCGCCCCCTCGAATGCGCTTGCGTATGTCGGCTCTCGGCTTTGTTT (revcomp)