Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS016569_Baylor_scaffold_10980 strand: - 15151-15262 ref: 15152-15263

Variable:  SRS016569_Baylor_scaffold_10980 strand: - 15384-15495 alnlen 111 mutations 13 involve-A 13 involve-T 0

GGCGGTGTGTGTTGCGTGCTTGTAACAATGCGAATGCGAATGGAGGTCTCGTTTATGCGAATGCGAATGACGCTTCTACGAATTCGAATACGAACGTCGGTGCCCGTCTTG (Template)
GGCGGTGTGTGTTGCGTGCTTGTTGCAGTGCGGGTGCGAGTGGGGGTCTCGTTTATGCGAGTGCGTATGACGCTTCTGCGGTTTCGAATACGAGCGTCGGTGCCCGTCTTG (Variable)
Template:  SRS016569_Baylor_scaffold_10980 strand: - 15151-15261 ref: 15152-15263

Variable:  SRS016569_Baylor_scaffold_10980 strand: - 40573-40683 alnlen 110 mutations 13 involve-A 13 involve-T 0

GCGGTGTGTGTTGCGTGCTTGTAACAATGCGAATGCGAATGGAGGTCTCGTTTATGCGAATGCGAATGACGCTTCTACGAATTCGAATACGAACGTCGGTGCCCGTCTTG (Template)
GCGGTGTGTGTTGCGTGCTTGTTACAATGCGCTTGCGGGTGGAGGTCTCGTTTGTGCGAATGCGTATGACGCTTCTGCGGATTCGGTTGCGAGCGTCGGTGCCCGTCTTG (Variable)