Template:  SRS017701_Baylor_scaffold_17293 strand: + 6203-6336 ref: 6203-6336
Variable:  SRS017701_Baylor_scaffold_17293 strand: + 5358-5491 alnlen 133 mutations 22 involve-A 20 involve-T 1

6203       GTGGCTCCGCTAACAACTGGTGGGAGCGTTCTCCTAATTCTGGCAACAGCAATAATTTCTGTAATGTCAACAGCAACGGCAACGCCAACAATAACAACGCCAACAACAGTAATGGCGTCGCTTTCGGATTCTG 
           :::::::::::: :  :::::::::::::::::::  :::::::  :::   :  :::::::: :::::::::: ::::::::::::::  :::: :::::: :: ::::: ::::::::: ::::: :::::
5358       GTGGCTCCGCTAGCTCCTGGTGGGAGCGTTCTCCTCTTTCTGGCGGCAG---TGCTTTCTGTATTGTCAACAGCTACGGCAACGCCAACTTTAACTACGCCACCAGCAGTATTGGCGTCGCGTTCGGCTTCTG