Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS017701_Baylor_scaffold_17293 strand: + 6203-6336 ref: 6203-6336

Variable:  SRS017701_Baylor_scaffold_17293 strand: + 5358-5491 alnlen 133 mutations 22 involve-A 20 involve-T 1

GTGGCTCCGCTAACAACTGGTGGGAGCGTTCTCCTAATTCTGGCAACAGCAATAATTTCTGTAATGTCAACAGCAACGGCAACGCCAACAATAACAACGCCAACAACAGTAATGGCGTCGCTTTCGGATTCTG (Template)
GTGGCTCCGCTAGCTCCTGGTGGGAGCGTTCTCCTCTTTCTGGCGGCAG---TGCTTTCTGTATTGTCAACAGCTACGGCAACGCCAACTTTAACTACGCCACCAGCAGTATTGGCGTCGCGTTCGGCTTCTG (Variable)