Template: SRS017821_Baylor_scaffold_547 strand: + 2251-2363 ref: 2251-2363 Variable: SRS017821_Baylor_scaffold_547 strand: + 1706-1818 alnlen 112 mutations 20 involve-A 20 involve-T 0 2251 GGTGTCTTGTTCGGCGGTAATGCGAATAACAGCGCGAATGCCGGGCTTTCGTACGCGAATACGAATAACACGGCTACGAATACGAATGCGAATATCGGCTCTCAGCTATACT :::::::::::::::::::::::: :: : ::::: :::::::::::::: :::: ::::: ::: : ::::: :: ::::: :::: :: ::::::::: ::: : :: 1706 GGTGTCTTGTTCGGCGGTAATGCGCGTAGCGGCGCGGCTGCCGGGCTTTCGTGCGCGTATACGTATAGCGCGGCTTCGGATACGGCTGCGTATGTCGGCTCTCGGCTTTGCT