Template:  SRS018656_WUGC_scaffold_1644 strand: + 37209-37307 ref: 37209-37307
Variable:  SRS018656_WUGC_scaffold_1644 strand: + 36572-36670 alnlen 98 mutations 10 involve-A 10 involve-T 0

37209      CGAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCCG 
           ::::::::::::: ::::::::::: ::::::::::: :: ::::: :::::: ::::  ::::::::::::::::  ::::::::::::::::::::
36572      CGAGTACAATTCCTACAACGCGTTCGTCTACAACGGCTACGCGGGCTACGTGAGCAACGGCAACAAGTATAACACGCTCGCCGTGCGTCCGGTTTCCG 
Template:  SRS018656_WUGC_scaffold_1644 strand: + 37210-37307 ref: 37209-37307
Variable:  SRS018656_WUGC_scaffold_1644 strand: + 6249-6346 alnlen 97 mutations 13 involve-A 13 involve-T 0

37210      GAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCCG 
           ::::::: :::::::: ::::::: ::::: ::::: :: ::::: :::::: :: :: ::::::::::::: ::  ::::::::::::::::::::
6249       GAGTACAGTTCCAACAGCGCGTTCGTCTACTACGGCTACGCGGGCGACGTGAGCAGCAGCAACAAGTATAACTCGGGCGCCGTGCGTCCGGTTTCCG