Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS018656_WUGC_scaffold_1644 strand: + 37209-37307 ref: 37209-37307

Variable:  SRS018656_WUGC_scaffold_1644 strand: + 36572-36670 alnlen 98 mutations 10 involve-A 10 involve-T 0

CGAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCCG (Template)
CGAGTACAATTCCTACAACGCGTTCGTCTACAACGGCTACGCGGGCTACGTGAGCAACGGCAACAAGTATAACACGCTCGCCGTGCGTCCGGTTTCCG (Variable)
Template:  SRS018656_WUGC_scaffold_1644 strand: + 37210-37307 ref: 37209-37307

Variable:  SRS018656_WUGC_scaffold_1644 strand: + 6249-6346 alnlen 97 mutations 13 involve-A 13 involve-T 0

GAGTACAATTCCAACAACGCGTTCATCTACAACGGCAACACGGGCAACGTGAACAACAACAACAAGTATAACACGAACGCCGTGCGTCCGGTTTCCG (Template)
GAGTACAGTTCCAACAGCGCGTTCGTCTACTACGGCTACGCGGGCGACGTGAGCAGCAGCAACAAGTATAACTCGGGCGCCGTGCGTCCGGTTTCCG (Variable)