Template:  SRS023583_Baylor_scaffold_6064 strand: - 7572-7686 ref: 7573-7687
Variable:  SRS023583_Baylor_scaffold_6064 strand: - 7770-7884 alnlen 114 mutations 22 involve-A 22 involve-T 0

7686       GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (revcomp)
           ::::::::::::: :::::  : ::  : ::::::::: ::: :::::::::::::::  :::: ::: : :::::::: :::::  :::: ::::: :::::: ::: :: ::
7884       GGGTGTCCTTTTCGGCGGTGCTGCGTCTGATGGCGATCTTGCGGGCTTCGGTTATGCGGGTACGGATAGCGCCCCCTCGCATACGGCTGCGTATGTCGGCTCTCGGCTTTGTTT (revcomp)
Template:  SRS023583_Baylor_scaffold_6064 strand: - 7575-7651 ref: 7573-7687
Variable:  SRS023583_Baylor_scaffold_6064 strand: - 46350-46426 alnlen 76 mutations 13 involve-A 13 involve-T 0

7651       ATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATG (revcomp)
           ::: ::: ::::::::::::::: ::::: :: :: :::::::: :::::  :::: ::::: :::::: ::: ::
46426      ATCGTGCGGGCTTCGGTTATGCGCATACGGATGACGCCCCCTCGCATACGGGTGCGCATGTCGGCTCTCGGCTTTG (revcomp)