Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS024132_Baylor_scaffold_11143 strand: - 28636-28748 ref: 28637-28749

Variable:  SRS024132_Baylor_scaffold_11143 strand: - 29350-29462 alnlen 112 mutations 16 involve-A 16 involve-T 0

TCAACCGAGAACAGTCCTGCGAACGCGTGGAATCTGAACTTTGGCGACGGCAACCTCAACAACTGGAACAATAAGGTTAAGGATAAGAATCATGTTCGCCCGGTGTCAGCAT (Template)
TCTACCGAGTGCAGTCCTGCGGGCGCGTGGGGTCTGTGCTTTGGCGACGGCACCCTCTACCACTGGTACGGTAAGGTTAAGGATAAGAATCGTGTTCGCCCGGTGTCAGCAT (Variable)