Template: SRS024331_LANL_scaffold_48022 strand: - 3951-4066 ref: 3952-4067 Variable: SRS024331_LANL_scaffold_48022 strand: - 4503-4618 alnlen 115 mutations 21 involve-A 21 involve-T 0 4066 GCGGTGTCCTGTTCAGCGGTAATGCGAATAACAGCGCGAATGCCGGTTTTGCGTATGCGAATTCGAATAACACGCCCTCGAATACGAATGCGAATGTCAGGTCTCGCCAATGATT (revcomp) :::::::::::::: ::::: ::::: :::: ::::: :::::::::::::::::::: ::::: : : :::::::: :: :: ::::: :::: ::::::::: :: :: 4618 GCGGTGTCCTGTTCTGCGGTTATGCGTCTAACGGCGCGTATGCCGGTTTTGCGTATGCGTATTCGTCTCGCGCGCCCTCGCATGCGTCTGCGAGTGTCGGGTCTCGCCTTTGCTT (revcomp)