Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS024435_LANL_scaffold_33181 strand: + 7968-8096 ref: 7968-8096

Variable:  SRS024435_LANL_scaffold_33181 strand: + 7092-7220 alnlen 128 mutations 17 involve-A 17 involve-T 0

GTTTTGGTCGTCCTCGGAGAACTCCGGCAACAACGCCCGGAACTGGAACGTGAACTCCGATGGCAACGTGAACTGCAACTGGAACAATAAGAACATCAACAACGACGTGCGACCTGTTCTAGCTTTTT (Template)
GTTTTGGTCGTCCTCGGAGTACTCCGGCTACGACGCCCGGTACTGGGGCGTGTACTCCGATGGCGACGTGAGCTGCCGCTGGAACGGTAAGAACGTCTTCAGCGACGTGCGACCTGTTCTAGCTTTTT (Variable)
Template:  SRS024435_LANL_scaffold_33181 strand: + 7968-8096 ref: 7968-8096

Variable:  SRS024435_LANL_scaffold_33181 strand: + 5302-5430 alnlen 128 mutations 19 involve-A 18 involve-T 0

GTTTTGGTCGTCCTCGGAGAACTCCGGCAACAACGCCCGGAACTGGAACGTGAACTCCGATGGCAACGTGAACTGCAACTGGAACAATAAGAACATCAACAACGACGTGCGACCTGTTCTAGCTTTTT (Template)
GTTTTGGTCGTCCTCGGAGCGCTCCGGCGACTACGCCCGGTACTGGGACGTGTGCTCCGGTGGCTACGTGGACTGACACTGGTACAGTAAGGACTTCAACGACGTCGTGCGACCTGTTCTAGCTTTTT (Variable)