Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS048164_WUGC_scaffold_28697 strand: - 12145-12257 ref: 12146-12258

Variable:  SRS048164_WUGC_scaffold_28697 strand: - 12342-12454 alnlen 112 mutations 12 involve-A 12 involve-T 0

CGCGGTGATTGCTGGCGGCAACCTCAACAATGGCCGGAATGCCGGGCCTTGTTACTTCAACTGCAACAATGCCCCGTCCAACTCGAACTGGAACCGCCGCGCGCGTCTTTCT (Template)
CGCGGTGTTTGCTGGCGGCGACCTCAACCTTGGCCGGAATGCCGGGCCTTGTTGCTTCAGCTGCTACGGTGCCCCGTCCAACTCGTACTGGGGCCGCCGCGCGCGTCTTTCT (Variable)