Template:  SRS050925_LANL_scaffold_32081 strand: + 346-474 ref: 346-474
Variable:  SRS050925_LANL_scaffold_32081 strand: + 112-240 alnlen 128 mutations 18 involve-A 18 involve-T 0

346        CGCGAACGTCAACGGCTCTGTCCTTGCCGTCGGTGGGAATTGGAACAACACGACGAACGCGGGCTTGTGGAATTGGAACGGTAATTACGATCCGTCGAACACGAACTCGAACATCGGGGGTCGCATTT 
           ::::  :::: :::::::::::::::::::::::::: ::::: ::  :::: ::: ::::::::::::: ::::: :::::  :::::::::::::: ::::: ::::  ::::::::::::: :::
112        CGCGGTCGTCTACGGCTCTGTCCTTGCCGTCGGTGGGTATTGGGACGTCACGTCGAGCGCGGGCTTGTGGTATTGGTACGGTTTTTACGATCCGTCGATCACGAGCTCGCTCATCGGGGGTCGCCTTT