Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS050925_LANL_scaffold_32081 strand: + 346-474 ref: 346-474

Variable:  SRS050925_LANL_scaffold_32081 strand: + 112-240 alnlen 128 mutations 18 involve-A 18 involve-T 0

CGCGAACGTCAACGGCTCTGTCCTTGCCGTCGGTGGGAATTGGAACAACACGACGAACGCGGGCTTGTGGAATTGGAACGGTAATTACGATCCGTCGAACACGAACTCGAACATCGGGGGTCGCATTT (Template)
CGCGGTCGTCTACGGCTCTGTCCTTGCCGTCGGTGGGTATTGGGACGTCACGTCGAGCGCGGGCTTGTGGTATTGGTACGGTTTTTACGATCCGTCGATCACGAGCTCGCTCATCGGGGGTCGCCTTT (Variable)