Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray Template: SRS050925_LANL_scaffold_5503 strand: - 9241-9352 ref: 9238-9353 Variable: SRS050925_LANL_scaffold_5503 strand: - 9584-9695 alnlen 111 mutations 13 involve-A 13 involve-T 0 TTGCCCTGTTCGGTGGCAACCGTGGCAACGGGTCGAAGTGCGGTTTGTCGTACTGGAATGTGAACAACCCTGCGACGAACGTGAACACGAACATCGTGGCGAGCCAATCTT (Template) TTGCCCTGTTCGGTGGCGCCCGTGGCTACGGGTCGAAGTGCGGTTTGTCGTCCTGGTCTGTGAACGACCCTGCGACGCGCGTGAACACGGGCATCGTGGCGAGCCTTTCTT (Variable)