Template:  SRS050925_LANL_scaffold_73778 strand: + 2348-2436 ref: 2348-2436
Variable:  SRS050925_LANL_scaffold_73778 strand: + 1799-1887 alnlen 88 mutations 16 involve-A 15 involve-T 0

2348       GCTATAGCGCTAACAATGTTCAGTATGTCAATGACGATGGCAACGTCAACTACAACTGGTGTAGCAATGATTTTGGCGTGCGTCCGTT 
           ::::: :::::::: :::::  :::::::  :: :::::::  ::::  ::::  ::::::::::  :: ::::::::::::::::::
1799       GCTATGGCGCTAACGATGTTTTGTATGTCCTTGGCGATGGCGGCGTCCGCTACTTCTGGTGTAGCGTTGGTTTTGGCGTGCGTCCGTT