Template:  SRS054956_LANL_scaffold_45718 strand: + 11503-11630 ref: 11503-11630
Variable:  SRS054956_LANL_scaffold_45718 strand: + 10870-10997 alnlen 127 mutations 14 involve-A 13 involve-T 0

11503      GGCTTGCACGCGCTCATTGGCGGTGGCAACTGGAACAACGGGGTTCACGATGGTTCGCGGACTGTGAATTGCAACAATTATCCGTGGAACGTGAACACGAACATTGGCGTGTGGTGCGTCTGTGACT 
           ::::::::::::::: :::::::::::: ::::: : :::::::::::: ::::::::::::::::  :::::::  :::::: :::: ::::::::::  : ::::::::::::::::::::::::
10870      GGCTTGCACGCGCTCCTTGGCGGTGGCAGCTGGAGCGACGGGGTTCACGCTGGTTCGCGGACTGTGTTTTGCAACGCTTATCCATGGAGCGTGAACACGGGCGTTGGCGTGTGGTGCGTCTGTGACT