Template: SRS056259_LANL_scaffold_15498 strand: - 7959-8073 ref: 7960-8074 Variable: SRS056259_LANL_scaffold_15498 strand: - 8157-8271 alnlen 114 mutations 20 involve-A 20 involve-T 0 8073 GGGTGTCCTTTTCAGCGGTAATACGAATAATGGCGATCATGCAGGCTTCGGTTATGCGAATACGAATAACACCCCCTCGAATACGAATGCGAATGTCAGCTCTCAGCTATGATT (revcomp) ::::::::::::: ::::: ::::: :: :::::: :: ::: :::::::::: :::::::::: :: : ::::::::::: :: :::: ::::: :::::: ::: :: :: 8271 GGGTGTCCTTTTCGGCGGTTATACGCATTATGGCGGTCTTGCGGGCTTCGGTTTTGCGAATACGTATGCCGCCCCCTCGAATGCGCTTGCGTATGTCGGCTCTCGGCTTTGTTT (revcomp)