Template:  SRS057717_LANL_scaffold_2749 strand: - 9654-9773 ref: 9649-9774
Variable:  SRS057717_LANL_scaffold_2749 strand: - 10425-10544 alnlen 119 mutations 19 involve-A 17 involve-T 1

9773       GGTACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGAGCGGTTGCAGCACTT (revcomp)
           :::::::::::::::::::: :::::::: ::  :::::::: ::::: :::::::::::::::::::  : ::  :: ::::: :  ::::  ::::: :::::::::::::::: ::
10544      GGTACTGGAGTAGCAGTGAGGACAGTCAGTACGGCAGCTGGAGCGTGAGCTTTAGTAATGGCAACTTCGGCTACGGCAGCAAGTGCGGCAGTGGCATGGGGAGAGCGGTTGCAGCATTT (revcomp)