Template:  SRS058770_LANL_scaffold_24560 strand: + 265-378 ref: 265-378
Variable:  SRS058770_LANL_scaffold_24560 strand: + 6-119 alnlen 113 mutations 17 involve-A 16 involve-T 1

265        CTGGTGATCTCTGGCGCTAACGTGAACAACGGTACGAATGCCGGACCTTTCTACCGGAACTGTAACAACGGTACGGGTAATCTGAACTGGAACATCGGCGGTCGCCCACTTTG 
           :::::: ::::::::::: ::::: ::  :::: ::::::::::::::::::::::: :::::  : ::::: :::::  :::: ::::: :::::::::::::::: : :::
6          CTGGTGGTCTCTGGCGCTTACGTGGACCGCGGTGCGAATGCCGGACCTTTCTACCGGTACTGTTTCTACGGTGCGGGTGCTCTGTACTGGCACATCGGCGGTCGCCCTCATTG