Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  SRS063985_LANL_scaffold_23055 strand: - 2230-2345 ref: 2231-2346

Variable:  SRS063985_LANL_scaffold_23055 strand: - 2446-2561 alnlen 115 mutations 14 involve-A 14 involve-T 0

CTGTGCGGTGATTGCTGGCGGCAACCTCAACAATGGCCGGAACTACGGCCCTCGTTACTTCAACTGCAACAATGCCCCGTCGAACTCGAACTGGAACCGCCGCGCGCGTCTTTCT (Template)
CTGTGCGGTGGTTGCTGGCGGCTACCTCATCGTTGGCCGGAACTGCGGCCCTCGTTCCTTCAGCTGCGTCATTGCCCCGTCGGACTCGTACTGGGACCGCCGCGCGCGTCTTTCT (Variable)