Template: JQ680349.1 strand: - 39454-39573 ref: 39449-39574 Variable: JQ680349.1 strand: - 40225-40344 alnlen 119 mutations 18 involve-A 17 involve-T 0 39573 GGTACTGGAGTAGCAGTGAGAACAGTCAGAACAACAGCTGGAACGTGAACTTTAGTAATGGCAACTTCAACAACAACAACAAGTACAACAGTAACATGGTGAGGGCGGTTGCAGCACTT (revcomp) :::::::::::::::::::: :::::::::: ::::::: :::: ::::::::::::::::::: :::: :: ::::: : :::::: : :::::::::::::::::::: :: 40344 GGTACTGGAGTAGCAGTGAGGGCAGTCAGAACGGCAGCTGGCTCGTGGGCTTTAGTAATGGCAACTTCGGCAACCTCAGCAAGTGCTACAGTACCGTGGTGAGGGCGGTTGCAGCATTT (revcomp)