Template:  JQ680361.1 strand: - 21695-21806 ref: 21692-21807
Variable:  JQ680361.1 strand: - 22037-22148 alnlen 111 mutations 12 involve-A 11 involve-T 1

21806      TTGCCCTGTTCGGTGGCAACCGTGGCAACGGGTCGAAGTGCGGTTTGTCGTACTGGAATGTGAACAACCCTGCGACGAACGTGAACACGAACATCGTGGCGAGCCAATCTT (revcomp)
           :::::::::::::::::  ::::::: ::::::::::::::::::::::: ::::: :::::  :::::::::::::  ::::: ::::::::::::::::::::  ::::
22148      TTGCCCTGTTCGGTGGCCTCCGTGGCGACGGGTCGAAGTGCGGTTTGTCGGACTGGTATGTGGTCAACCCTGCGACGGCCGTGAGCACGAACATCGTGGCGAGCCTTTCTT (revcomp)