Template: JQ680371.1 strand: + 4471-4580 ref: 4471-4580 Variable: JQ680371.1 strand: + 4101-4210 alnlen 109 mutations 11 involve-A 11 involve-T 0 4471 CCGTGTGGTCTATCGTGGCAACAACAACGCGAACCCGAATGGCGGTGTTTCGATGTCGAATGCGAACAACGATTCCTCGAATACGAACACGAACATCGGTTCTCGTCTG :::::::::::::::::::: :::: ::::: :::: :::::::::::::::::::: ::::::::: :::::::::: :: ::: ::::: :::::::::::::::: 4101 CCGTGTGGTCTATCGTGGCAGCAACTCCGCGATCCCGCATGGCGGTGTTTCGATGTCGCATGCGAACAGCGATTCCTCGTATGCGAGCACGAGCATCGGTTCTCGTCTG