Template:  AFOP01000002.1 strand: + 58895-59013 ref: 58895-59013
Variable:  AFOP01000002.1 strand: + 58350-58468 alnlen 118 mutations 9 involve-A 9 involve-T 0

58895      GCTGTGCTATTGGGCGCGAACTGGGACAACTCTGGCTTCGCTGGGGCTCGCGCGTCGAACTGGAACAACGAGCCGTGGAACTCGAACGACAATGTGGGCGCTCGCGGCCTCTGTGACC 
           ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: ::::  :::::::::::::  ::::  ::::: ::::::::::::::::::::::::::
58350      GCTGTGCTATTGGGCGCGAACTGGGGCAACTCTGGCTTCGCTGGGGCTCGCGCGTCGAGCTGGGGCAACGAGCCGTGGGGCTCGGGCGACAGTGTGGGCGCTCGCGGCCTCTGTGACC