Color scheme: A-to-N substitutions are highlighted in yellow; other substitutions in gray
Template:  AGXU01000044.1 strand: + 11831-11941 ref: 11831-11941

Variable:  AGXU01000044.1 strand: + 11456-11566 alnlen 110 mutations 11 involve-A 9 involve-T 1

GCCGTGTGGTTTATCGTGGCAACAACAACGCGAACCCGAATGGCGGTGTCTCGATGTCGAATGCGAACAACGATTCCTCGAATACGAACACGAACATCGGTTCTCGTCTG (Template)
GCCGTGTGGTCTATCGTGGCACCAGCTACGCGCACCCGCATGGCGGTGTTTCGATGTCGTATGCGTACAACGATTCCTCGTATACGAGCACGAACATCGGTTCTCGTCTG (Variable)