Template:  CAHI01000003.1 strand: + 134917-135085 ref: 134917-135084
Variable:  CAHI01000003.1 strand: + 132604-132772 alnlen 168 mutations 15 involve-A 15 involve-T 0

134917     CCGCTTCGGGCTATCGCAACCGCACGTCCGGTGCGCTGACGAATGTCGGCTCCAACGGTTACAGTTGGTCGTCATCGCCGACACAGAGTTCGACGAATGCAGGCAACTTGAATTTCAACGCCACGAACGTGAACCCGCAGAATAATAACAGCCGCGCTTACGGCTTCC 
           ::::::::::::::::::::::: :::::::::::::::::::::::::::::  :::::::::::::::::: :::::::::::::::::: ::: :::::::  :::: ::::::::::: :: ::::: ::::::::  :::: :::::::::::::::::::::
132604     CCGCTTCGGGCTATCGCAACCGCGCGTCCGGTGCGCTGACGAATGTCGGCTCCGGCGGTTACAGTTGGTCGTCGTCGCCGACACAGAGTTCGGCGAGTGCAGGCTTCTTGTATTTCAACGCCGCGTACGTGCACCCGCAGGGTAATTACAGCCGCGCTTACGGCTTCC