Template:  LCHE01000003.1 strand: - 9245-9370 ref: 9246-9371
Variable:  LCHE01000003.1 strand: + 10460-10585 alnlen 125 mutations 17 involve-A 16 involve-T 0
(on different strand)
9370       GTGCAGTCTTCCGACGGTAACTCCGTCAACGTTGGCAACTTCGACTCGGACGGTCTCAACGTGAACAACGATTCCCGCGACAATGCGAATTCGAATCTCGGTGTCTGCCCCTCTCGGCAGTATCG (revcomp)
           ::::::::::::::::::  :::::::  :::::::  ::::: ::::: ::::::: ::::: ::: ::::::::::: : ::::: ::::: ::::::::::::::::::::::: ::: :::
10460      GTGCAGTCTTCCGACGGTGGCTCCGTCCGCGTTGGCGGCTTCGGCTCGGGCGGTCTCCACGTGCACAGCGATTCCCGCGTCCATGCGGATTCGCATCTCGGTGTCTGCCCCTCTCGGTAGTTTCG 
Template:  LCHE01000003.1 strand: - 9245-9369 ref: 9246-9371
Variable:  LCHE01000003.1 strand: + 13063-13187 alnlen 124 mutations 18 involve-A 17 involve-T 0
(on different strand)
9369       TGCAGTCTTCCGACGGTAACTCCGTCAACGTTGGCAACTTCGACTCGGACGGTCTCAACGTGAACAACGATTCCCGCGACAATGCGAATTCGAATCTCGGTGTCTGCCCCTCTCGGCAGTATCG (revcomp)
           ::::::::::::::::: :::::::: ::::::::  ::::: ::::: :::::::  :::: ::: :: :::::::: :  :::: :::::: :::::::::::::::::::::: ::: :::
13063      TGCAGTCTTCCGACGGTCACTCCGTCTACGTTGGCTTCTTCGGCTCGGTCGGTCTCGTCGTGTACAGCGGTTCCCGCGGCGGTGCGTATTCGAGTCTCGGTGTCTGCCCCTCTCGGTAGTTTCG 
Template:  LCHE01000003.1 strand: - 9246-9370 ref: 9246-9371
Variable:  LCHE01000003.1 strand: + 15967-16091 alnlen 124 mutations 20 involve-A 19 involve-T 0
(on different strand)
9370       GTGCAGTCTTCCGACGGTAACTCCGTCAACGTTGGCAACTTCGACTCGGACGGTCTCAACGTGAACAACGATTCCCGCGACAATGCGAATTCGAATCTCGGTGTCTGCCCCTCTCGGCAGTATC (revcomp)
           :::: :::::::: ::::  ::::::: ::::::::  :::::::::::::::::::  ::::  :  :: :::::::: :  :::: ::::::::::::::::::::::::::::: ::: ::
15967      GTGCGGTCTTCCGGCGGTTTCTCCGTCTACGTTGGCGGCTTCGACTCGGACGGTCTCGGCGTGGGCGGCGGTTCCCGCGGCCGTGCGGATTCGAATCTCGGTGTCTGCCCCTCTCGGTAGTTTC