Template:  NC_015160.1 strand: - 940266-940387 ref: 940267-940388
Variable:  NC_015160.1 strand: - 940623-940744 alnlen 121 mutations 13 involve-A 13 involve-T 0

940387     GGCTTCGTGTCCGCCTCTCCGGTGCTAACGCTAACAATGGCACGAATGCAGGGGCGTTTGCTACGAATACGAACAATGCAGCCTCGAATTCGAATGCGAATGTGTCCGCTCCCCTATACTT (revcomp)
           ::::::::::::::::::::::::::: :::: ::: :::: ::  ::: :::::::::::::::::: ::::: ::::::::::: ::::: :::::::::::::::::::::: : :::
940744     GGCTTCGTGTCCGCCTCTCCGGTGCTAGCGCTTACAGTGGCGCGTCTGCGGGGGCGTTTGCTACGAATGCGAACGATGCAGCCTCGTATTCGTATGCGAATGTGTCCGCTCCCCTCTGCTT (revcomp)