Template:  NZ_AKJT01000025.1 strand: + 40819-40919 ref: 40816-40923
Variable:  NZ_AKJT01000025.1 strand: + 40121-40221 alnlen 100 mutations 14 involve-A 14 involve-T 0

40819      CGCAGCGCTCCGCCAACAACGCATTCAACATGAACTTCGATGATGGCAATCAGAACAACAACGACAAGAACAACGAGCTCCGCGTCCGCCCCGTCCGCAG 
           :::::::::::::: ::  :::::::: ::::: ::::: ::::::: ::::: ::  :  ::::::: :: ::::::::::::::::::::::::::::
40121      CGCAGCGCTCCGCCGACCTCGCATTCACCATGAGCTTCGCTGATGGCTATCAGTACGGCGGCGACAAGTACTACGAGCTCCGCGTCCGCCCCGTCCGCAG 
Template:  NZ_AKJT01000025.1 strand: + 40819-40923 ref: 40816-40923
Variable:  NZ_AKJT01000025.1 strand: + 39435-39539 alnlen 104 mutations 16 involve-A 15 involve-T 1

40819      CGCAGCGCTCCGCCAACAACGCATTCAACATGAACTTCGATGATGGCAATCAGAACAACAACGACAAGAACAACGAGCTCCGCGTCCGCCCCGTCCGCAGATTC 
           :::::::::::::: ::  :::: ::  :::: :::::: :::::::  :::: ::  :: :: :::::::: :::::::::::::::::::::::::::::::
39435      CGCAGCGCTCCGCCTACGGCGCAGTCCTCATGTACTTCGGTGATGGCCTTCAGTACGGCAGCGGCAAGAACAGCGAGCTCCGCGTCCGCCCCGTCCGCAGATTC 
Template:  NZ_AKJT01000025.1 strand: + 40818-40923 ref: 40816-40923
Variable:  NZ_AKJT01000025.1 strand: + 37509-37614 alnlen 105 mutations 21 involve-A 21 involve-T 0

40818      TCGCAGCGCTCCGCCAACAACGCATTCAACATGAACTTCGATGATGGCAATCAGAACAACAACGACAAGAACAACGAGCTCCGCGTCCGCCCCGTCCGCAGATTC 
           ::::::::::::::: ::  :::::::  ::::  ::::: :: ::::  ::::  :: :  :: ::::  :  :::::::::::::::::::::::::::::::
37509      TCGCAGCGCTCCGCCGACTTCGCATTCGGCATGCTCTTCGGTGTTGGCGGTCAGGGCAGCTTCGGCAAGGGCGGCGAGCTCCGCGTCCGCCCCGTCCGCAGATTC